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A gentle introduction to the wild world of filtering SNPs
A realistic workflow to simulate variants
Sorting data by linked-read barcode
As of Harpy v3, the program will auto-detect that your input FASTQ or BAM files are not linked-read data. This can also be forced with --unlinked / -U. You can safely ignore the linked-read information in some of the reports Harpy produces.
--unlinked
-U
Deciding between using Conda or Containers
Why pool samples for SV calling and when to do it
v3.2
