Extract linked-read barcodes

You might want a list of all the unique barcodes in your data and extract will do just that.

usage
djinn fastq extract INPUT...

example
djinn fastq extract sample1.F.fq.gz sample1.R.fq.gz > sample1.bc

usage
djinn sam extract INPUT

example
djinn sam extract sample1.bam > sample1.bc

fastq bam